Publications
2024
Murphy D., Salataj E., Di Giammartino D.C., Rodriguez-Hernaez J., Kloetgen A., Garg V., Char E., Uyehara C.M., Ee L.-S., Lee U.J., Stadtfeld M., Hadjantonakis A.-K., Tsirigos A., Polyzos A., Apostolou E.
3D Enhancer–promoter networks provide predictive features for gene expression and coregulation in early embryonic lineages
Nature Structural and Molecular Biology, vol. 31, (no. 1), pp. 125-140
Article
Journal
2024
Setti A., Mariani D., Castagnetti F., Vitiello E., Stufera Mecarelli L., D'Angelo A., Santini T., di Timoteo G., Giuliani A., Perego E., Zappone S., Liessi N., Armirotti A., Vicidomini G., Bozzoni I.
ALS-associated FUS mutation reshapes the RNA and protein composition of Stress Granules
The RNA Society 29th Annual Meeting
Poster
Conference
2024
Myers S.H., Poppi L., Rinaldi F., Veronesi M., Ciamarone A., Previtali V., Bagnolini G., Schipani F., Ortega Martinez J.A., Girotto S., Di Stefano G., Farabegoli F., Walsh N., De Franco F., Roberti M., Cavalli A.
An 19F NMR fragment-based approach for the discovery and development of BRCA2-RAD51 inhibitors to pursuit synthetic lethality in combination with PARP inhibition in pancreatic cancer
European Journal of Medicinal Chemistry, vol. 265
2024
La Rosa L., Spattini C., Pelizzoli R., Pereira R., De Pietri Tonelli D.
A novel immune-competent murine model of brain tumors and its use to evaluate the efficacy of a microRNA-based therapy for medulloblastoma
EMBO Workshop "Microglia in health and disease"
Poster
Conference
2024
Maestri S., Furlan M., Mulroney L., Coscujuela Tarrero L., Ugolini C., Dalla Pozza F., Leonardi T., Birney E., Nicassio F., Pelizzola M.
Benchmarking of computational methods for m6A profiling with Nanopore direct RNA sequencing
Briefings in Bioinformatics
2024
Sharma H., Valentine M. N. Z., Toki N., Nishiyori H. S., Gustincich S., Takahashi H., Carninci P.
Decryption of sequence, structure, and functional features of SINE repeat elements in SINEUP non-coding RNA–mediated post-transcriptional gene regulation
Nature Communications, vol. 15, (no. 1), pp. 1400
Article
Journal
2024
Scala M., Tomati V., Ferla M., Lena M., Cohen J., Fatemi Ali., Brokamp Elly., Bican A., Phillips J., Koziura Mary., Nicouleau M., Rio M., Siquier-Pernet K., Boddaert N., Musante I., Tamburro S., Baldassari S., Iacomino M., Scudieri P., Network Undiagnosed., Rosenfeld Jill., Bellus Gary., Reed Sara., Al Saif Hind., Sanchez Rossana., Walsh Matthew., Cantagrel Vincent., Crunk Amy., Gustincich Stefano., Striano P., Severino M., Salpietro V., Pedemonte N., Zara F.
De novo variants in DENND5B cause a neurodevelopmental disorder.
American Journal of Human Genetics
2024
Ferri L., Menghi V., Licchetta L., Dimartino P., Minardi R., Davì C., Di Vito L., Cifaldi E., Zenesini C., Gozzo F., Pelliccia V., Mariani V., de Spelorzi Y.C.C., Gustincich S., Seri M., Tassi L., Pippucci T., Bisulli F.
Detection of somatic and germline pathogenic variants in adult cohort of drug-resistant focal epilepsies
Epilepsy and Behavior
Article
Journal
2024
Tuntevski K., Beatini S., Giantomasi L., Gasperini C., Pelizzoli R., Cossu R.M., Sanges R., Gustincich S., De Pietri Tonelli D.
Dissecting the Mechanism of piRNA Biogenesis and Function in Adult Somatic Stem Cells of the Murine Hippocampal Niche
5th International Conference on the Long and the Short of Non-Coding RNAs (06/17/2024 - 06/22/2024; Chania, Crete, Greece)
Poster
Conference
2024
Calandra F., Siciliano V.
Engineered Protease-Responsive RNA-Binding Proteins (RBPs) to Expand the Toolbox of Synthetic Circuits in Mammalian Cells
Methods in molecular biology (Clifton, N.J.), vol. 2774, pp. 59-69
Book Chapter
Book Series
2024
Beatini S., Giantomasi L., Tuntevski K., Pelizzoli R., Sanges R., De Pietri Tonelli D.
Exploring the role of the piRNA pathway in microglia and neuroinflammation
EMBO Workshop "Microglia in health and disease"
Poster
Conference
2024
Giantomasi L., Beatini S., Tuntevski K., Pelizzoli R., Sanges R., De Pietri Tonelli D.
Exploring the role of the piRNA pathway in microglia and neuroinflammation
5th International Conference on the Long and the Short of Non-Coding RNAs
Poster
Conference
2024
Miladi M., Tartaglia G., Lang B., Hentze M.W., Sahadevan S., Huber W., Schwarzl T., Backofen R.
Improved discovery of RNA-binding protein binding sites in eCLIP data using DEWSeq
Nucleic Acids Research, vol. 52, (no. 1)
2024
Di Timoteo G., Giuliani A., Setti A., Biagi M. C., Lisi M., Santini T., Grandioso A., Mariani D., Castagnetti F., Perego E., Zappone S., Lattante S., Sabatelli M., Rotili D., Vicidomini G., Bozzoni I.
M6A reduction relieves FUS-associated ALS granules
Nature Communications
Article
Journal
2024
Luige J., Armaos A., Tartaglia G.G., Orom U.A.V.
Predicting nuclear G-quadruplex RNA-binding proteins with roles in transcription and phase separation
Nature Communications, vol. 15, (no. 1)