Publications
2025
Vitiello E., Castagnetti F., Stufera Mecarelli L., D'Ambra E., Tollis P., Ruocco G., Laneve P., Caffarelli E., Mariani D., Bozzoni I.
Live-cell imaging of circular and long non-coding RNAs associated to FUS pathological aggregates by Pepper fluorescent RNA
RNA
Article in Press
Journal
2025
Rancati S., Pereira R.C., Schlich M., Sgroi S., Beatini S., La Rosa L., Giantomasi L., Pelizzoli R., Braccia C., Spattini C., Tuntevski K., Lo Van A., Pons Espinal M., Palange A., Bajetto A., Daga A., Armirotti A., Florio T., Decuzzi P., De Pietri Tonelli D.
Synergic microRNAs suppress human glioblastoma progression by modulating clinically relevant targets
BiorXiv
Article
E-print Archive
2024
Murphy D., Salataj E., Di Giammartino D.C., Rodriguez-Hernaez J., Kloetgen A., Garg V., Char E., Uyehara C.M., Ee L.-S., Lee U.J., Stadtfeld M., Hadjantonakis A.-K., Tsirigos A., Polyzos A., Apostolou E.
3D Enhancer–promoter networks provide predictive features for gene expression and coregulation in early embryonic lineages
Nature Structural and Molecular Biology, vol. 31, (no. 1), pp. 125-140
Article
Journal
2024
Bucci A., Held M. O., Bega L., Vicidomini G.
4D real-time Single-Particle Tracking with a laser-scanning microscope featuring a SPAD-array detector
FOM - Focus on Microscopy
Poster
Conference
2024
Bucci A., Tortarolo G., Held M.O., Bega L., Perego E., Castagnetti F., Bozzoni I., Slenders E., Vicidomini G.
4D Single-particle tracking with asynchronous read-out single-photon avalanche diode array detector
Nature Communications, vol. 15, (no. 1)
2024
Ivankovic M., Brand J.N., Pandolfini L., Brown T., Pippel M., Rozanski A., Grohme M.A., Winkler S., Schubert T., Robledillo L., Vila-Farré M., Zhang S., Gustincich S., Papantonis A., Marquez A., Rink J.C.
A comparative analysis of planarian genomes indicates regulatory conservation in the face of rapid structural divergence
Nature Communications, vol. 15, (no. 1), pp. 8215
2024
Marzi M.J., Rubolino C., D'Onghia M., Tordonato C., Giuliani B., Nicassio F.
AEGEAN AWARD: Canonical and non-canonical Target-Directed MicroRNA Degradation controls cell fitness and transcriptional plasticity in breast cancer
5th International Aegean Conference on the Long and the Short of Non-Coding RNAs
Poster
Conference
2024
Gözde F., Landuzzi F., Brambilla A., Charrance D., Furia F., Trova S., Peracino A., Camenisch G., Waldvogel D., Howard-McCombe J., Spelorzi Y., Henzen E., Bernagozzi A., Coppe A., Christille J.M., Vecchi M., Vozzi D., Cavalli A., Bassano B., Gustincich S., Croll D., Pandolfini L., Grossen C.
A highly contiguous reference genome for the Alpine ibex (Capra ibex)
bioRxiv
Article
Journal
2024
Mariani D., Setti A., Castagnetti F., Vitiello E., Stufera Mecarelli L., Di Timoteo G., Giuliani A., D'Angelo A., Santini T., Perego E., Zappone S., Liessi N., Armirotti A., Vicidomini G., Bozzoni I.
ALS-associated FUS mutation reshapes the RNA and protein composition of stress granules
Nucleic Acids Research, vol. 52, (no. 21), pp. 13269-13289
2024
Setti A., Mariani D., Castagnetti F., Vitiello E., Stufera Mecarelli L., D'Angelo A., Santini T., di Timoteo G., Giuliani A., Perego E., Zappone S., Liessi N., Armirotti A., Vicidomini G., Bozzoni I.
ALS-associated FUS mutation reshapes the RNA and protein composition of Stress Granules
The RNA Society 29th Annual Meeting
Poster
Conference
2024
Mariani D., Setti A., Stufera Mecarelli L., Castagnetti F., Vitiello E., D'Angelo A., Santini T., Di Timoteo G., Giuliani A., Perego E., Zappone S., Vicidomini G., Bozzoni I.
ALS-associated FUS mutation reshapes the RNA-protein composition of Stress Granules and affects the late endosome-mediated transport of synaptic RNAs
non-coding RNA in brain development, function and evolution
Poster
Conference
2024
Abate C., Decherchi S., Cavalli A.
AMCG: a graph dual atomic-molecular conditional molecular generator
Machine Learning: Science and Technology, vol. 5, (no. 3)
2024
Reale R., Ghoreishi M., Peruzzi G., Ruocco G., Leonetti M.
A microfluidic scanning flow cytometer with superior signal-to-noise-ratio for label-free characterization of small particles
EPJ Web of Conferences, vol. 309
2024
Myers S.H., Poppi L., Rinaldi F., Veronesi M., Ciamarone A., Previtali V., Bagnolini G., Schipani F., Ortega Martinez J.A., Girotto S., Di Stefano G., Farabegoli F., Walsh N., De Franco F., Roberti M., Cavalli A.
An 19F NMR fragment-based approach for the discovery and development of BRCA2-RAD51 inhibitors to pursuit synthetic lethality in combination with PARP inhibition in pancreatic cancer
European Journal of Medicinal Chemistry, vol. 265
2024
Moroni A., Mercutio C., Rey G., Piermaria P., Leone R., Russo A., Beltrame M., Tonini R., Saponaro A., Thiel G.
An engineered potassium channel for thermogenetics
Biophysical Journal, vol. 123, (no. 3)
Conference Paper
Journal